Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.56■□□□□ 0.08
SOX11P35716 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.56■□□□□ 0.08
SOX11P35716 AC069224.1-201ENST00000566372 1715 ntBASIC15.56■□□□□ 0.08
SOX11P35716 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.56■□□□□ 0.08
SOX11P35716 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SOX11P35716 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.56■□□□□ 0.08
SOX11P35716 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SOX11P35716 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.56■□□□□ 0.08
SOX11P35716 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.56■□□□□ 0.08
SOX11P35716 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.55■□□□□ 0.08
SOX11P35716 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX11P35716 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SOX11P35716 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.55■□□□□ 0.08
SOX11P35716 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX11P35716 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.55■□□□□ 0.08
SOX11P35716 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 AC079140.1-201ENST00000508039 487 ntBASIC15.55■□□□□ 0.08
SOX11P35716 AC109322.1-201ENST00000524499 1264 ntBASIC15.55■□□□□ 0.08
SOX11P35716 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SOX11P35716 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
SOX11P35716 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SOX11P35716 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.55■□□□□ 0.08
SOX11P35716 AL135744.1-201ENST00000565098 629 ntBASIC15.55■□□□□ 0.08
SOX11P35716 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.55■□□□□ 0.08
SOX11P35716 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.55■□□□□ 0.08
SOX11P35716 AL009183.1-201ENST00000603760 355 ntBASIC15.55■□□□□ 0.08
SOX11P35716 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SOX11P35716 LINC00628-201ENST00000628516 1289 ntBASIC15.55■□□□□ 0.08
SOX11P35716 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SOX11P35716 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SOX11P35716 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
SOX11P35716 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SOX11P35716 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX11P35716 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SOX11P35716 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
SOX11P35716 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SOX11P35716 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.54■□□□□ 0.08
SOX11P35716 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX11P35716 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SOX11P35716 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.54■□□□□ 0.08
SOX11P35716 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.54■□□□□ 0.08
SOX11P35716 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SOX11P35716 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX11P35716 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SOX11P35716 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX11P35716 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SOX11P35716 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX11P35716 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SOX11P35716 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.54■□□□□ 0.08
SOX11P35716 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
SOX11P35716 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX11P35716 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 AC098799.1-201ENST00000504752 800 ntBASIC15.54■□□□□ 0.08
SOX11P35716 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.54■□□□□ 0.08
SOX11P35716 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX11P35716 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.54■□□□□ 0.08
SOX11P35716 AC243562.1-201ENST00000560672 389 ntBASIC15.54■□□□□ 0.08
SOX11P35716 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.54■□□□□ 0.08
SOX11P35716 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.54■□□□□ 0.08
SOX11P35716 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SOX11P35716 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX11P35716 AC007686.3-201ENST00000619017 3487 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms