Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CD40LGP29965 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD40LGP29965 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD40LGP29965 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40LGP29965 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.07□□□□□ -0.16
CD40LGP29965 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.07□□□□□ -0.16
CD40LGP29965 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40LGP29965 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40LGP29965 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.07□□□□□ -0.16
CD40LGP29965 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.07□□□□□ -0.16
CD40LGP29965 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
CD40LGP29965 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.07□□□□□ -0.16
CD40LGP29965 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.07□□□□□ -0.16
CD40LGP29965 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40LGP29965 RNF126P1-202ENST00000569893 925 ntBASIC14.07□□□□□ -0.16
CD40LGP29965 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD40LGP29965 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD40LGP29965 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40LGP29965 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD40LGP29965 KRT18P1-202ENST00000452408 1331 ntBASIC14.07□□□□□ -0.16
CD40LGP29965 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CD40LGP29965 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD40LGP29965 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
CD40LGP29965 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40LGP29965 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CD40LGP29965 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD40LGP29965 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CD40LGP29965 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD40LGP29965 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CD40LGP29965 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.06□□□□□ -0.16
CD40LGP29965 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CD40LGP29965 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CD40LGP29965 SPDYE13P-201ENST00000445314 798 ntBASIC14.06□□□□□ -0.16
CD40LGP29965 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 AL138831.2-201ENST00000606564 490 ntBASIC14.06□□□□□ -0.16
CD40LGP29965 PPT1-213ENST00000641319 2388 ntBASIC14.06□□□□□ -0.16
CD40LGP29965 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40LGP29965 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CD40LGP29965 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.06□□□□□ -0.16
CD40LGP29965 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.06□□□□□ -0.16
CD40LGP29965 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40LGP29965 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms