Protein–RNA interactions for Protein: P26992

CNTFR, Ciliary neurotrophic factor receptor subunit alpha, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFRP26992 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNTFRP26992 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNTFRP26992 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNTFRP26992 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.74□□□□□ -0.37
CNTFRP26992 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNTFRP26992 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CNTFRP26992 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CNTFRP26992 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
CNTFRP26992 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.73□□□□□ -0.37
CNTFRP26992 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CNTFRP26992 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.73□□□□□ -0.37
CNTFRP26992 SPDYE17-201ENST00000412399 783 ntBASIC12.73□□□□□ -0.37
CNTFRP26992 RPL37AP1-201ENST00000412502 279 ntBASIC12.73□□□□□ -0.37
CNTFRP26992 HIST3H2BA-201ENST00000436555 524 ntBASIC12.73□□□□□ -0.37
CNTFRP26992 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.73□□□□□ -0.37
CNTFRP26992 HNRNPUP1-201ENST00000554987 333 ntBASIC12.73□□□□□ -0.37
CNTFRP26992 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
CNTFRP26992 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.73□□□□□ -0.37
CNTFRP26992 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.73□□□□□ -0.37
CNTFRP26992 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.73□□□□□ -0.37
CNTFRP26992 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.73□□□□□ -0.37
CNTFRP26992 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CNTFRP26992 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.73□□□□□ -0.37
CNTFRP26992 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CNTFRP26992 AC144831.1-201ENST00000573312 2656 ntBASIC12.73□□□□□ -0.37
CNTFRP26992 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CNTFRP26992 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNTFRP26992 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 NORAD-201ENST00000565493 5339 ntBASIC12.72□□□□□ -0.37
CNTFRP26992 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
CNTFRP26992 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.72□□□□□ -0.37
CNTFRP26992 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 KRT8P12-202ENST00000472924 1397 ntBASIC12.72□□□□□ -0.37
CNTFRP26992 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CNTFRP26992 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CNTFRP26992 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CNTFRP26992 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CNTFRP26992 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 AL080243.2-201ENST00000418783 582 ntBASIC12.72□□□□□ -0.37
CNTFRP26992 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.72□□□□□ -0.37
CNTFRP26992 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CNTFRP26992 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 KLF2P3-201ENST00000451977 1087 ntBASIC12.72□□□□□ -0.37
CNTFRP26992 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.72□□□□□ -0.37
CNTFRP26992 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.72□□□□□ -0.37
CNTFRP26992 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.72□□□□□ -0.37
CNTFRP26992 AC097359.3-201ENST00000603982 1210 ntBASIC12.72□□□□□ -0.37
CNTFRP26992 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.72□□□□□ -0.37
CNTFRP26992 AL138828.2-201ENST00000615812 383 ntBASIC12.72□□□□□ -0.37
CNTFRP26992 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNTFRP26992 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms