Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMLP26374 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19■□□□□ 0.63
CHMLP26374 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMLP26374 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.99■□□□□ 0.63
CHMLP26374 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 AC084364.1-201ENST00000551967 1556 ntBASIC18.99■□□□□ 0.63
CHMLP26374 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.99■□□□□ 0.63
CHMLP26374 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.99■□□□□ 0.63
CHMLP26374 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.99■□□□□ 0.63
CHMLP26374 AC107890.1-201ENST00000422478 521 ntBASIC18.99■□□□□ 0.63
CHMLP26374 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.99■□□□□ 0.63
CHMLP26374 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.99■□□□□ 0.63
CHMLP26374 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.99■□□□□ 0.63
CHMLP26374 AC069120.2-201ENST00000524091 540 ntBASIC18.99■□□□□ 0.63
CHMLP26374 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.99■□□□□ 0.63
CHMLP26374 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.99■□□□□ 0.63
CHMLP26374 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.99■□□□□ 0.63
CHMLP26374 LINC01115-203ENST00000606068 577 ntBASIC18.99■□□□□ 0.63
CHMLP26374 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.99■□□□□ 0.63
CHMLP26374 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHMLP26374 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.99■□□□□ 0.63
CHMLP26374 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
CHMLP26374 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.99■□□□□ 0.63
CHMLP26374 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.99■□□□□ 0.63
CHMLP26374 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMLP26374 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMLP26374 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHMLP26374 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMLP26374 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.98■□□□□ 0.63
CHMLP26374 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMLP26374 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMLP26374 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMLP26374 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.98■□□□□ 0.63
CHMLP26374 AC097493.3-201ENST00000509725 367 ntBASIC18.98■□□□□ 0.63
CHMLP26374 SLED1-202ENST00000512051 380 ntBASIC18.98■□□□□ 0.63
CHMLP26374 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.98■□□□□ 0.63
CHMLP26374 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 AL844908.2-201ENST00000609461 460 ntBASIC18.98■□□□□ 0.63
CHMLP26374 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.98■□□□□ 0.63
CHMLP26374 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMLP26374 AC023024.2-201ENST00000623561 1993 ntBASIC18.98■□□□□ 0.63
CHMLP26374 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMLP26374 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHMLP26374 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHMLP26374 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMLP26374 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CHMLP26374 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHMLP26374 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CHMLP26374 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHMLP26374 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CHMLP26374 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMLP26374 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMLP26374 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMLP26374 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMLP26374 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CHMLP26374 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMLP26374 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CHMLP26374 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMLP26374 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMLP26374 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMLP26374 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMLP26374 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMLP26374 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms