Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CHMP24386 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP24386 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CHMP24386 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.83□□□□□ -0.03
CHMP24386 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CHMP24386 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHMP24386 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP24386 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.83□□□□□ -0.04
CHMP24386 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 AC093724.1-201ENST00000448659 1027 ntBASIC14.83□□□□□ -0.04
CHMP24386 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.83□□□□□ -0.04
CHMP24386 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP24386 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CHMP24386 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.83□□□□□ -0.04
CHMP24386 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP24386 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.83□□□□□ -0.04
CHMP24386 SPTSSB-204ENST00000617024 1292 ntBASIC14.83□□□□□ -0.04
CHMP24386 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 AC093028.1-201ENST00000622998 982 ntBASIC14.83□□□□□ -0.04
CHMP24386 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CHMP24386 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CHMP24386 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP24386 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CHMP24386 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP24386 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.82□□□□□ -0.04
CHMP24386 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 AC087481.3-201ENST00000602886 1894 ntBASIC14.82□□□□□ -0.04
CHMP24386 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.82□□□□□ -0.04
CHMP24386 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 HAUS4P1-201ENST00000406739 1145 ntBASIC14.82□□□□□ -0.04
CHMP24386 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 CNN2P2-201ENST00000443536 909 ntBASIC14.82□□□□□ -0.04
CHMP24386 FAM86GP-201ENST00000448322 971 ntBASIC14.82□□□□□ -0.04
CHMP24386 CNN2P3-201ENST00000450201 906 ntBASIC14.82□□□□□ -0.04
CHMP24386 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 AC069262.1-201ENST00000539058 672 ntBASIC14.82□□□□□ -0.04
CHMP24386 AC026150.2-201ENST00000564693 1156 ntBASIC14.82□□□□□ -0.04
CHMP24386 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 AL136317.3-201ENST00000618497 906 ntBASIC14.82□□□□□ -0.04
CHMP24386 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.82□□□□□ -0.04
CHMP24386 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.82□□□□□ -0.04
CHMP24386 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CHMP24386 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.82□□□□□ -0.04
CHMP24386 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHMP24386 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CHMP24386 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.81□□□□□ -0.04
CHMP24386 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms