Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
XPAP23025 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 AC087499.6-201ENST00000411576 835 ntBASIC15.95■□□□□ 0.14
XPAP23025 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.95■□□□□ 0.14
XPAP23025 COX20P2-201ENST00000452636 358 ntBASIC15.95■□□□□ 0.14
XPAP23025 AC093004.1-201ENST00000508850 424 ntBASIC15.95■□□□□ 0.14
XPAP23025 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.95■□□□□ 0.14
XPAP23025 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
XPAP23025 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
XPAP23025 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.95■□□□□ 0.14
XPAP23025 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.95■□□□□ 0.14
XPAP23025 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.95■□□□□ 0.14
XPAP23025 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.95■□□□□ 0.14
XPAP23025 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.95■□□□□ 0.14
XPAP23025 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.94■□□□□ 0.14
XPAP23025 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.94■□□□□ 0.14
XPAP23025 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
XPAP23025 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.94■□□□□ 0.14
XPAP23025 Z97205.2-201ENST00000564697 1639 ntBASIC15.94■□□□□ 0.14
XPAP23025 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
XPAP23025 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
XPAP23025 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.94■□□□□ 0.14
XPAP23025 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.94■□□□□ 0.14
XPAP23025 MEP1AP4-201ENST00000423244 1087 ntBASIC15.94■□□□□ 0.14
XPAP23025 DFFBP1-201ENST00000433250 979 ntBASIC15.94■□□□□ 0.14
XPAP23025 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.94■□□□□ 0.14
XPAP23025 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.94■□□□□ 0.14
XPAP23025 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.94■□□□□ 0.14
XPAP23025 SPDYE18-201ENST00000510091 1050 ntBASIC15.94■□□□□ 0.14
XPAP23025 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.94■□□□□ 0.14
XPAP23025 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.94■□□□□ 0.14
XPAP23025 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.94■□□□□ 0.14
XPAP23025 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.94■□□□□ 0.14
XPAP23025 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
XPAP23025 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 LINC02447-202ENST00000501888 2146 ntBASIC15.94■□□□□ 0.14
XPAP23025 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
XPAP23025 AC069224.1-201ENST00000566372 1715 ntBASIC15.94■□□□□ 0.14
XPAP23025 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.94■□□□□ 0.14
XPAP23025 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
XPAP23025 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
XPAP23025 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
XPAP23025 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
XPAP23025 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
XPAP23025 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
XPAP23025 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
XPAP23025 AL353779.1-201ENST00000434793 351 ntBASIC15.93■□□□□ 0.14
XPAP23025 TARDBPP1-201ENST00000442013 1203 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms