Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH3P22223 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH3P22223 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDH3P22223 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CDH3P22223 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CDH3P22223 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CDH3P22223 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDH3P22223 REXO1L8P-201ENST00000604378 1897 ntBASIC15.57■□□□□ 0.08
CDH3P22223 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH3P22223 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH3P22223 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH3P22223 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 TNRC18P2-201ENST00000417666 2714 ntBASIC15.56■□□□□ 0.08
CDH3P22223 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 AP002414.2-201ENST00000591780 3365 ntBASIC15.56■□□□□ 0.08
CDH3P22223 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 RPL37AP1-201ENST00000412502 279 ntBASIC15.56■□□□□ 0.08
CDH3P22223 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH3P22223 TSPY16P-201ENST00000449843 468 ntBASIC15.56■□□□□ 0.08
CDH3P22223 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH3P22223 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH3P22223 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH3P22223 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH3P22223 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CDH3P22223 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CDH3P22223 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH3P22223 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH3P22223 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH3P22223 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH3P22223 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDH3P22223 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CDH3P22223 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDH3P22223 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH3P22223 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH3P22223 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH3P22223 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH3P22223 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 AC004890.2-204ENST00000481968 304 ntBASIC15.55■□□□□ 0.08
CDH3P22223 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH3P22223 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.55■□□□□ 0.08
CDH3P22223 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH3P22223 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH3P22223 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH3P22223 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms