Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB4AP20338 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB4AP20338 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 KRT17P2-201ENST00000300992 1314 ntBASIC12.19□□□□□ -0.46
RAB4AP20338 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RAB4AP20338 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB4AP20338 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 CICP16-201ENST00000502609 2813 ntBASIC12.19□□□□□ -0.46
RAB4AP20338 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 MIR718-201ENST00000390190 70 ntBASIC12.19□□□□□ -0.46
RAB4AP20338 STARP1-201ENST00000397973 869 ntBASIC12.19□□□□□ -0.46
RAB4AP20338 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB4AP20338 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.19□□□□□ -0.46
RAB4AP20338 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
RAB4AP20338 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB4AP20338 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RAB4AP20338 AL031432.5-201ENST00000641059 760 ntBASIC12.19□□□□□ -0.46
RAB4AP20338 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB4AP20338 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB4AP20338 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB4AP20338 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB4AP20338 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 KRT8P49-201ENST00000604166 1432 ntBASIC12.19□□□□□ -0.46
RAB4AP20338 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
RAB4AP20338 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RAB4AP20338 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB4AP20338 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB4AP20338 AC018442.1-201ENST00000421439 2061 ntBASIC12.18□□□□□ -0.46
RAB4AP20338 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 AC112504.1-201ENST00000623415 1841 ntBASIC12.18□□□□□ -0.46
RAB4AP20338 AC132938.5-201ENST00000624980 1813 ntBASIC12.18□□□□□ -0.46
RAB4AP20338 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
RAB4AP20338 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 CDC14C-201ENST00000428251 1719 ntBASIC12.18□□□□□ -0.46
RAB4AP20338 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 MMP23A-201ENST00000234610 1017 ntBASIC12.18□□□□□ -0.46
RAB4AP20338 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB4AP20338 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RAB4AP20338 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB4AP20338 KLF4P1-201ENST00000412782 1185 ntBASIC12.18□□□□□ -0.46
RAB4AP20338 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB4AP20338 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms