Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NELFEP18615 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NELFEP18615 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NELFEP18615 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NELFEP18615 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.71■□□□□ 0.1
NELFEP18615 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NELFEP18615 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.7■□□□□ 0.1
NELFEP18615 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.7■□□□□ 0.1
NELFEP18615 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NELFEP18615 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.7■□□□□ 0.1
NELFEP18615 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.7■□□□□ 0.1
NELFEP18615 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.7■□□□□ 0.1
NELFEP18615 PPT1-215ENST00000641471 2368 ntBASIC15.7■□□□□ 0.1
NELFEP18615 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.7■□□□□ 0.1
NELFEP18615 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.7■□□□□ 0.1
NELFEP18615 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.7■□□□□ 0.1
NELFEP18615 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.7■□□□□ 0.1
NELFEP18615 AC241585.1-201ENST00000433527 519 ntBASIC15.7■□□□□ 0.1
NELFEP18615 AC093724.1-201ENST00000448659 1027 ntBASIC15.7■□□□□ 0.1
NELFEP18615 RNA5SP410-201ENST00000516285 106 ntBASIC15.7■□□□□ 0.1
NELFEP18615 AC027369.6-201ENST00000525520 931 ntBASIC15.7■□□□□ 0.1
NELFEP18615 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.7■□□□□ 0.1
NELFEP18615 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.7■□□□□ 0.1
NELFEP18615 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.7■□□□□ 0.1
NELFEP18615 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
NELFEP18615 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.7■□□□□ 0.1
NELFEP18615 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.7■□□□□ 0.1
NELFEP18615 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NELFEP18615 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.7■□□□□ 0.1
NELFEP18615 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NELFEP18615 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.7■□□□□ 0.1
NELFEP18615 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.7■□□□□ 0.1
NELFEP18615 FLJ16779-201ENST00000612722 7638 ntBASIC15.69■□□□□ 0.1
NELFEP18615 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.69■□□□□ 0.1
NELFEP18615 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NELFEP18615 CICP13-201ENST00000422015 2789 ntBASIC15.69■□□□□ 0.1
NELFEP18615 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NELFEP18615 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.69■□□□□ 0.1
NELFEP18615 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.69■□□□□ 0.1
NELFEP18615 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.69■□□□□ 0.1
NELFEP18615 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.69■□□□□ 0.1
NELFEP18615 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.69■□□□□ 0.1
NELFEP18615 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 AC138761.1-201ENST00000584393 385 ntBASIC15.69■□□□□ 0.1
NELFEP18615 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.69■□□□□ 0.1
NELFEP18615 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.69■□□□□ 0.1
NELFEP18615 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.69■□□□□ 0.1
NELFEP18615 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 AC126755.1-201ENST00000525846 6405 ntBASIC15.69■□□□□ 0.1
NELFEP18615 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NELFEP18615 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.69■□□□□ 0.1
NELFEP18615 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NELFEP18615 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NELFEP18615 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NELFEP18615 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.68■□□□□ 0.1
NELFEP18615 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.68■□□□□ 0.1
NELFEP18615 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NELFEP18615 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NELFEP18615 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NELFEP18615 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NELFEP18615 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NELFEP18615 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NELFEP18615 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NELFEP18615 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NELFEP18615 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms