Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN1P18031 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN1P18031 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PTPN1P18031 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN1P18031 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN1P18031 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN1P18031 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN1P18031 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
PTPN1P18031 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN1P18031 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PTPN1P18031 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PTPN1P18031 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PTPN1P18031 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PTPN1P18031 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN1P18031 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN1P18031 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN1P18031 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.67■□□□□ 0.26
PTPN1P18031 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN1P18031 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
PTPN1P18031 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN1P18031 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN1P18031 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PTPN1P18031 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN1P18031 AL596325.1-201ENST00000563991 1082 ntBASIC16.67■□□□□ 0.26
PTPN1P18031 AC036164.1-201ENST00000570544 333 ntBASIC16.67■□□□□ 0.26
PTPN1P18031 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN1P18031 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.67■□□□□ 0.26
PTPN1P18031 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN1P18031 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN1P18031 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN1P18031 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN1P18031 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PTPN1P18031 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PTPN1P18031 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN1P18031 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN1P18031 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PTPN1P18031 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTPN1P18031 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTPN1P18031 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTPN1P18031 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 AL121723.1-201ENST00000445194 1519 ntBASIC16.66■□□□□ 0.26
PTPN1P18031 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN1P18031 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN1P18031 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.66■□□□□ 0.26
PTPN1P18031 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 HYMAI-201ENST00000635591 3347 ntBASIC16.66■□□□□ 0.26
PTPN1P18031 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
PTPN1P18031 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
PTPN1P18031 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PTPN1P18031 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTPN1P18031 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PTPN1P18031 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN1P18031 RN7SL692P-201ENST00000464677 288 ntBASIC16.66■□□□□ 0.26
PTPN1P18031 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN1P18031 ELK1P1-201ENST00000485699 580 ntBASIC16.66■□□□□ 0.26
PTPN1P18031 AC104596.2-201ENST00000512793 793 ntBASIC16.66■□□□□ 0.26
PTPN1P18031 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN1P18031 WASH4P-201ENST00000564273 1246 ntBASIC16.66■□□□□ 0.26
PTPN1P18031 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.66■□□□□ 0.26
PTPN1P18031 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN1P18031 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN1P18031 AL358472.5-202ENST00000641448 1267 ntBASIC16.66■□□□□ 0.26
PTPN1P18031 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN1P18031 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN1P18031 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN1P18031 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PTPN1P18031 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms