Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.37■□□□□ 0.37
SMPD1P17405 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.37■□□□□ 0.37
SMPD1P17405 AC068587.10-201ENST00000641210 219 ntBASIC17.37■□□□□ 0.37
SMPD1P17405 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
SMPD1P17405 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 AC148477.4-201ENST00000613430 1793 ntBASIC17.37■□□□□ 0.37
SMPD1P17405 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.37■□□□□ 0.37
SMPD1P17405 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SMPD1P17405 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.36■□□□□ 0.37
SMPD1P17405 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.36■□□□□ 0.37
SMPD1P17405 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.36■□□□□ 0.37
SMPD1P17405 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.36■□□□□ 0.37
SMPD1P17405 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SMPD1P17405 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.36■□□□□ 0.37
SMPD1P17405 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMPD1P17405 BTBD6P1-201ENST00000412176 1267 ntBASIC17.36■□□□□ 0.37
SMPD1P17405 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.36■□□□□ 0.37
SMPD1P17405 AC114812.1-204ENST00000449669 728 ntBASIC17.36■□□□□ 0.37
SMPD1P17405 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.36■□□□□ 0.37
SMPD1P17405 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMPD1P17405 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 ECM1P1-201ENST00000604092 1279 ntBASIC17.36■□□□□ 0.37
SMPD1P17405 AL022328.3-201ENST00000607943 679 ntBASIC17.36■□□□□ 0.37
SMPD1P17405 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SMPD1P17405 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.36■□□□□ 0.37
SMPD1P17405 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.36■□□□□ 0.37
SMPD1P17405 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SMPD1P17405 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
SMPD1P17405 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMPD1P17405 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.36■□□□□ 0.37
SMPD1P17405 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.36■□□□□ 0.37
SMPD1P17405 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 PKD1P1-201ENST00000458669 6805 ntBASIC17.36■□□□□ 0.37
SMPD1P17405 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMPD1P17405 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.35■□□□□ 0.37
SMPD1P17405 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
SMPD1P17405 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.35■□□□□ 0.37
SMPD1P17405 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMPD1P17405 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.35■□□□□ 0.37
SMPD1P17405 CD8B2-202ENST00000417670 633 ntBASIC17.35■□□□□ 0.37
SMPD1P17405 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.35■□□□□ 0.37
SMPD1P17405 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.35■□□□□ 0.37
SMPD1P17405 HOMER2P2-201ENST00000451621 847 ntBASIC17.35■□□□□ 0.37
SMPD1P17405 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.35■□□□□ 0.37
SMPD1P17405 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.35■□□□□ 0.37
SMPD1P17405 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.35■□□□□ 0.37
SMPD1P17405 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.35■□□□□ 0.37
SMPD1P17405 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.35■□□□□ 0.37
SMPD1P17405 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SMPD1P17405 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.35■□□□□ 0.37
SMPD1P17405 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.35■□□□□ 0.37
SMPD1P17405 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 AC022188.1-201ENST00000620960 1664 ntBASIC17.35■□□□□ 0.37
SMPD1P17405 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.35■□□□□ 0.37
SMPD1P17405 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMPD1P17405 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms