Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC172P0C7W6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC172P0C7W6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC172P0C7W6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC172P0C7W6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC172P0C7W6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC172P0C7W6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC172P0C7W6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.15■□□□□ 0.34
CCDC172P0C7W6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 PPT1-215ENST00000641471 2368 ntBASIC17.15■□□□□ 0.34
CCDC172P0C7W6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 AC079140.1-201ENST00000508039 487 ntBASIC17.15■□□□□ 0.34
CCDC172P0C7W6 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.15■□□□□ 0.34
CCDC172P0C7W6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 MTDHP5-201ENST00000598980 586 ntBASIC17.15■□□□□ 0.34
CCDC172P0C7W6 AL121894.2-201ENST00000602977 491 ntBASIC17.15■□□□□ 0.34
CCDC172P0C7W6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 AC105250.1-201ENST00000509378 2057 ntBASIC17.15■□□□□ 0.34
CCDC172P0C7W6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 AC136621.1-201ENST00000624017 2304 ntBASIC17.15■□□□□ 0.34
CCDC172P0C7W6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC172P0C7W6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.14■□□□□ 0.34
CCDC172P0C7W6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 AC006058.4-201ENST00000624016 1670 ntBASIC17.14■□□□□ 0.33
CCDC172P0C7W6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 SNX18-202ENST00000343017 3140 ntBASIC17.14■□□□□ 0.33
CCDC172P0C7W6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 AC004832.2-201ENST00000426397 482 ntBASIC17.14■□□□□ 0.33
CCDC172P0C7W6 SPCS2P4-201ENST00000436160 681 ntBASIC17.14■□□□□ 0.33
CCDC172P0C7W6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 LINC01225-203ENST00000563550 1244 ntBASIC17.14■□□□□ 0.33
CCDC172P0C7W6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms