Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 SPDYE18-201ENST00000510091 1050 ntBASIC19.47■□□□□ 0.71
SMARCA5O60264 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.47■□□□□ 0.71
SMARCA5O60264 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.47■□□□□ 0.71
SMARCA5O60264 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.47■□□□□ 0.71
SMARCA5O60264 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.47■□□□□ 0.71
SMARCA5O60264 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMARCA5O60264 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.47■□□□□ 0.71
SMARCA5O60264 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.47■□□□□ 0.71
SMARCA5O60264 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SMARCA5O60264 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.47■□□□□ 0.71
SMARCA5O60264 Z97205.2-201ENST00000564697 1639 ntBASIC19.47■□□□□ 0.71
SMARCA5O60264 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMARCA5O60264 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 AC103702.1-201ENST00000548801 2630 ntBASIC19.46■□□□□ 0.71
SMARCA5O60264 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.46■□□□□ 0.71
SMARCA5O60264 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SMARCA5O60264 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SMARCA5O60264 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCA5O60264 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCA5O60264 SERBP1P3-201ENST00000459980 809 ntBASIC19.46■□□□□ 0.71
SMARCA5O60264 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCA5O60264 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.46■□□□□ 0.71
SMARCA5O60264 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCA5O60264 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SMARCA5O60264 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
SMARCA5O60264 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SMARCA5O60264 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMARCA5O60264 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.46■□□□□ 0.71
SMARCA5O60264 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.46■□□□□ 0.71
SMARCA5O60264 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCA5O60264 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.46■□□□□ 0.71
SMARCA5O60264 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMARCA5O60264 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SMARCA5O60264 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 AC138035.3-201ENST00000622706 2791 ntBASIC19.45■□□□□ 0.7
SMARCA5O60264 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCA5O60264 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMARCA5O60264 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCA5O60264 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 C18orf15-201ENST00000623680 2534 ntBASIC19.45■□□□□ 0.7
SMARCA5O60264 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCA5O60264 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.45■□□□□ 0.7
SMARCA5O60264 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.45■□□□□ 0.7
SMARCA5O60264 AC241585.1-201ENST00000433527 519 ntBASIC19.45■□□□□ 0.7
SMARCA5O60264 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.45■□□□□ 0.7
SMARCA5O60264 AC009477.1-201ENST00000452936 217 ntBASIC19.45■□□□□ 0.7
SMARCA5O60264 CYMP-203ENST00000474680 1263 ntBASIC19.45■□□□□ 0.7
SMARCA5O60264 AC004890.2-204ENST00000481968 304 ntBASIC19.45■□□□□ 0.7
SMARCA5O60264 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
SMARCA5O60264 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.45■□□□□ 0.7
SMARCA5O60264 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SMARCA5O60264 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMARCA5O60264 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.45■□□□□ 0.7
SMARCA5O60264 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCA5O60264 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCA5O60264 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCA5O60264 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SMARCA5O60264 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCA5O60264 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCA5O60264 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
SMARCA5O60264 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMARCA5O60264 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCA5O60264 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCA5O60264 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCA5O60264 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCA5O60264 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCA5O60264 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms