Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 RTN3P1-201ENST00000536295 711 ntBASIC16.17■□□□□ 0.18
TRANK1O15050 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
TRANK1O15050 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.16■□□□□ 0.18
TRANK1O15050 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 RPS9P1-201ENST00000419943 583 ntBASIC16.16■□□□□ 0.18
TRANK1O15050 AC073150.1-201ENST00000450406 1084 ntBASIC16.16■□□□□ 0.18
TRANK1O15050 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.16■□□□□ 0.18
TRANK1O15050 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TRANK1O15050 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRANK1O15050 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.16■□□□□ 0.18
TRANK1O15050 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.16■□□□□ 0.18
TRANK1O15050 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRANK1O15050 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRANK1O15050 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.16■□□□□ 0.18
TRANK1O15050 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.16■□□□□ 0.18
TRANK1O15050 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.16■□□□□ 0.18
TRANK1O15050 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.16■□□□□ 0.18
TRANK1O15050 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.16■□□□□ 0.18
TRANK1O15050 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.16■□□□□ 0.18
TRANK1O15050 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.16■□□□□ 0.18
TRANK1O15050 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.16■□□□□ 0.18
TRANK1O15050 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.16■□□□□ 0.18
TRANK1O15050 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.16■□□□□ 0.18
TRANK1O15050 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRANK1O15050 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRANK1O15050 AC106794.1-201ENST00000506935 792 ntBASIC16.15■□□□□ 0.18
TRANK1O15050 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
TRANK1O15050 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRANK1O15050 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.15■□□□□ 0.18
TRANK1O15050 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRANK1O15050 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRANK1O15050 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.15■□□□□ 0.18
TRANK1O15050 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.15■□□□□ 0.18
TRANK1O15050 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.15■□□□□ 0.18
TRANK1O15050 AC087045.2-201ENST00000606279 1003 ntBASIC16.15■□□□□ 0.18
TRANK1O15050 AC103691.2-201ENST00000618824 433 ntBASIC16.15■□□□□ 0.18
TRANK1O15050 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.15■□□□□ 0.18
TRANK1O15050 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRANK1O15050 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRANK1O15050 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRANK1O15050 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.15■□□□□ 0.18
TRANK1O15050 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.15■□□□□ 0.18
TRANK1O15050 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.15■□□□□ 0.18
TRANK1O15050 CASP16P-204ENST00000635032 809 ntBASIC16.15■□□□□ 0.18
TRANK1O15050 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRANK1O15050 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
TRANK1O15050 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.14■□□□□ 0.17
TRANK1O15050 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRANK1O15050 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.14■□□□□ 0.17
TRANK1O15050 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
TRANK1O15050 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 LINC02199-201ENST00000506655 2702 ntBASIC16.14■□□□□ 0.17
TRANK1O15050 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
TRANK1O15050 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 AC010141.1-201ENST00000411585 623 ntBASIC16.14■□□□□ 0.17
TRANK1O15050 AC130709.1-201ENST00000484779 1212 ntBASIC16.14■□□□□ 0.17
TRANK1O15050 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
TRANK1O15050 AC092171.5-201ENST00000608012 942 ntBASIC16.14■□□□□ 0.17
TRANK1O15050 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRANK1O15050 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms