Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AC089987.1-201ENST00000551654 2209 ntBASIC13.78□□□□□ -0.2
HMX3A6NHT5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 RCN1P2-201ENST00000398357 915 ntBASIC13.78□□□□□ -0.2
HMX3A6NHT5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 MIR3180-1-201ENST00000580374 94 ntBASIC13.78□□□□□ -0.2
HMX3A6NHT5 MIR3180-3-201ENST00000584616 94 ntBASIC13.78□□□□□ -0.2
HMX3A6NHT5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 BNIP3P18-201ENST00000593976 575 ntBASIC13.78□□□□□ -0.2
HMX3A6NHT5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AC092119.3-201ENST00000612618 583 ntBASIC13.78□□□□□ -0.2
HMX3A6NHT5 AD001527.2-201ENST00000622994 785 ntBASIC13.78□□□□□ -0.2
HMX3A6NHT5 AC093458.2-201ENST00000623150 629 ntBASIC13.78□□□□□ -0.2
HMX3A6NHT5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 AL353593.2-201ENST00000602529 1483 ntBASIC13.78□□□□□ -0.2
HMX3A6NHT5 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.78□□□□□ -0.2
HMX3A6NHT5 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMX3A6NHT5 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMX3A6NHT5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.77□□□□□ -0.2
HMX3A6NHT5 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMX3A6NHT5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMX3A6NHT5 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 AP002414.1-201ENST00000391405 1147 ntBASIC13.77□□□□□ -0.21
HMX3A6NHT5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 IGHV3-47-201ENST00000425060 335 ntBASIC13.77□□□□□ -0.21
HMX3A6NHT5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 AC104819.1-201ENST00000504587 486 ntBASIC13.77□□□□□ -0.21
HMX3A6NHT5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 AC010331.1-201ENST00000611423 582 ntBASIC13.77□□□□□ -0.21
HMX3A6NHT5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 PPT1-213ENST00000641319 2388 ntBASIC13.77□□□□□ -0.21
HMX3A6NHT5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMX3A6NHT5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
HMX3A6NHT5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms