Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RNU1-129P-201ENST00000384064 167 ntBASIC17.23■□□□□ 0.35
CCDC66A2RUB6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.23■□□□□ 0.35
CCDC66A2RUB6 HNRNPDP1-201ENST00000439535 754 ntBASIC17.23■□□□□ 0.35
CCDC66A2RUB6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 U1.21-201ENST00000580816 167 ntBASIC17.23■□□□□ 0.35
CCDC66A2RUB6 RN7SL510P-201ENST00000581311 263 ntBASIC17.23■□□□□ 0.35
CCDC66A2RUB6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 AC004790.2-201ENST00000623588 572 ntBASIC17.23■□□□□ 0.35
CCDC66A2RUB6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 TPM4P1-201ENST00000436100 807 ntBASIC17.22■□□□□ 0.35
CCDC66A2RUB6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 FAM197Y8-203ENST00000450145 560 ntBASIC17.22■□□□□ 0.35
CCDC66A2RUB6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 EMBP1-201ENST00000458200 901 ntBASIC17.22■□□□□ 0.35
CCDC66A2RUB6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 LINC00552-201ENST00000625151 2579 ntBASIC17.22■□□□□ 0.35
CCDC66A2RUB6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC66A2RUB6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 PMS2P4-201ENST00000412466 1052 ntBASIC17.21■□□□□ 0.35
CCDC66A2RUB6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 AF186996.4-201ENST00000467186 377 ntBASIC17.21■□□□□ 0.35
CCDC66A2RUB6 CXCL1P1-201ENST00000502804 216 ntBASIC17.21■□□□□ 0.35
CCDC66A2RUB6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 AC012640.2-201ENST00000561606 901 ntBASIC17.21■□□□□ 0.35
CCDC66A2RUB6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 AL121912.1-201ENST00000603683 238 ntBASIC17.21■□□□□ 0.35
CCDC66A2RUB6 AL031055.1-201ENST00000606362 631 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms