Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 AP001505.2-201ENST00000616815 443 ntBASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC022211.2-201ENST00000585075 2527 ntBASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 AGGF1P2-201ENST00000426656 2106 ntBASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC245884.6-201ENST00000515672 1067 ntBASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC005730.2-201ENST00000564549 1184 ntBASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 CU633904.3-201ENST00000624042 1029 ntBASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC022188.1-201ENST00000620960 1664 ntBASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LOC102724428A0A0B4J2F2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LOC102724428A0A0B4J2F2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LOC102724428A0A0B4J2F2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
LOC102724428A0A0B4J2F2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.77■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 MIR769-201ENST00000390225 118 ntBASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 RN7SL720P-201ENST00000488178 304 ntBASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 AP003171.2-201ENST00000528208 925 ntBASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 RN7SL713P-201ENST00000582127 302 ntBASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC073413.1-201ENST00000603927 732 ntBASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LOC102724428A0A0B4J2F2 KRT8P14-201ENST00000414254 1442 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms