Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 IGHGP-201ENST00000390555 1178 ntBASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 AC034232.1-201ENST00000506026 1064 ntBASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 AL136038.4-201ENST00000603606 1261 ntBASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 AC243591.1-201ENST00000452967 1364 ntBASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAPPC1Q9Y5R8 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 MIR4492-201ENST00000581627 80 ntBASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 AC022517.1-201ENST00000592429 346 ntBASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 U82695.1-201ENST00000635752 1889 ntBASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 AC118758.2-201ENST00000614242 2813 ntBASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAPPC1Q9Y5R8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms