Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 AC108725.1-201ENST00000495472 409 ntBASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 KRT18P25-201ENST00000508931 1278 ntBASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 AC015910.1-201ENST00000579400 975 ntBASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 AP005019.2-201ENST00000615104 511 ntBASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB7Q9Y5E2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHB7Q9Y5E2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHB7Q9Y5E2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.89■□□□□ 0.3
PCDHB7Q9Y5E2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 AC023310.1-201ENST00000554836 735 ntBASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 RN7SL560P-201ENST00000577943 264 ntBASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 GNRHR2-203ENST00000581100 1187 ntBASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 AC008687.7-202ENST00000637404 953 ntBASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB7Q9Y5E2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 CNN2P8-201ENST00000421872 913 ntBASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 AC009542.2-202ENST00000619004 1067 ntBASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB7Q9Y5E2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB7Q9Y5E2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB7Q9Y5E2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB7Q9Y5E2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB7Q9Y5E2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms