Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 HTR5BP-201ENST00000430851 1154 ntBASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 AC079140.1-201ENST00000508039 487 ntBASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
POLR1DQ9Y2S0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 AC142381.1-201ENST00000426099 345 ntBASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 DNAJB3-201ENST00000446806 729 ntBASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 KRT8P48-201ENST00000515599 1220 ntBASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR1DQ9Y2S0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR1DQ9Y2S0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms