Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 SPCS2P1-201ENST00000561636 679 ntBASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DTX4Q9Y2E6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 AC090616.6-203ENST00000579186 1945 ntBASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 MIR661-201ENST00000384842 89 ntBASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 SLED1-202ENST00000512051 380 ntBASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 RNA5SP421-201ENST00000516864 134 ntBASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 AC135586.1-201ENST00000539323 574 ntBASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 AC104794.3-201ENST00000566840 1248 ntBASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.63□□□□□ -0.07
DTX4Q9Y2E6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
DTX4Q9Y2E6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms