Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 AC005622.1-201ENST00000636801 1703 ntBASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 MIR574-201ENST00000385209 96 ntBASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 AC002347.1-201ENST00000569543 541 ntBASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 AC092865.6-201ENST00000642101 219 ntBASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HHLA3Q9XRX5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 PMS2P7-201ENST00000506558 1336 ntBASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 AC023274.1-201ENST00000418278 595 ntBASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HHLA3Q9XRX5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms