Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 MIR4783-201ENST00000580343 82 ntBASIC19.86■□□□□ 0.77
SCN11AQ9UI33 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN11AQ9UI33 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 RN7SKP175-201ENST00000408472 289 ntBASIC19.85■□□□□ 0.77
SCN11AQ9UI33 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.85■□□□□ 0.77
SCN11AQ9UI33 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 AL136309.1-201ENST00000403917 691 ntBASIC19.85■□□□□ 0.77
SCN11AQ9UI33 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.85■□□□□ 0.77
SCN11AQ9UI33 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 SERPINA13P-202ENST00000478994 924 ntBASIC19.85■□□□□ 0.77
SCN11AQ9UI33 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCN11AQ9UI33 AC010491.1-201ENST00000563101 2797 ntBASIC19.85■□□□□ 0.77
SCN11AQ9UI33 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 AC015818.8-201ENST00000587907 1519 ntBASIC19.84■□□□□ 0.77
SCN11AQ9UI33 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 HIST2H2BC-201ENST00000498492 580 ntBASIC19.84■□□□□ 0.77
SCN11AQ9UI33 RHOQP1-201ENST00000555758 579 ntBASIC19.84■□□□□ 0.77
SCN11AQ9UI33 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCN11AQ9UI33 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
SCN11AQ9UI33 POM121L10P-201ENST00000436994 1285 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms