Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 SDHAP3-202ENST00000515467 728 ntBASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SDHAF3Q9NRP4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SDHAF3Q9NRP4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms