Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 AC006001.1-201ENST00000325130 474 ntBASIC17.53■□□□□ 0.4
VTA1Q9NP79 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 AC145423.3-201ENST00000615987 467 ntBASIC17.53■□□□□ 0.4
VTA1Q9NP79 GPR182-203ENST00000622922 591 ntBASIC17.53■□□□□ 0.4
VTA1Q9NP79 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VTA1Q9NP79 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VTA1Q9NP79 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 RPL13AP20-201ENST00000459725 609 ntBASIC17.52■□□□□ 0.4
VTA1Q9NP79 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 RN7SL560P-201ENST00000577943 264 ntBASIC17.52■□□□□ 0.4
VTA1Q9NP79 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.52■□□□□ 0.4
VTA1Q9NP79 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VTA1Q9NP79 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VTA1Q9NP79 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VTA1Q9NP79 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VTA1Q9NP79 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VTA1Q9NP79 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VTA1Q9NP79 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
VTA1Q9NP79 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VTA1Q9NP79 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
VTA1Q9NP79 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.52■□□□□ 0.39
VTA1Q9NP79 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VTA1Q9NP79 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VTA1Q9NP79 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.52■□□□□ 0.39
VTA1Q9NP79 AL138709.1-201ENST00000614840 1693 ntBASIC17.52■□□□□ 0.39
VTA1Q9NP79 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 FAM197Y7-201ENST00000432892 766 ntBASIC17.51■□□□□ 0.39
VTA1Q9NP79 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms