Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 TEX28P1-201ENST00000613479 1221 ntBASIC13.57□□□□□ -0.24
GCM1Q9NP62 TEX28P2-201ENST00000617764 1221 ntBASIC13.57□□□□□ -0.24
GCM1Q9NP62 AL390754.1-201ENST00000619088 582 ntBASIC13.57□□□□□ -0.24
GCM1Q9NP62 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.57□□□□□ -0.24
GCM1Q9NP62 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 BNIP3P1-202ENST00000550043 1585 ntBASIC13.57□□□□□ -0.24
GCM1Q9NP62 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.56□□□□□ -0.24
GCM1Q9NP62 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 BASP1P1-201ENST00000430708 665 ntBASIC13.56□□□□□ -0.24
GCM1Q9NP62 AC241585.1-201ENST00000433527 519 ntBASIC13.56□□□□□ -0.24
GCM1Q9NP62 AC093214.1-201ENST00000511688 1107 ntBASIC13.56□□□□□ -0.24
GCM1Q9NP62 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 AL590560.3-201ENST00000623350 461 ntBASIC13.56□□□□□ -0.24
GCM1Q9NP62 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
GCM1Q9NP62 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GCM1Q9NP62 AC100757.3-201ENST00000622361 1406 ntBASIC13.56□□□□□ -0.24
GCM1Q9NP62 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 RNA5SP421-201ENST00000516864 134 ntBASIC13.55□□□□□ -0.24
GCM1Q9NP62 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 AL513523.2-202ENST00000427283 2040 ntBASIC13.55□□□□□ -0.24
GCM1Q9NP62 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
GCM1Q9NP62 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.55□□□□□ -0.24
GCM1Q9NP62 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms