Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 AC068418.2-201ENST00000577309 3703 ntBASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 AL592309.1-201ENST00000443127 649 ntBASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 PCDHA3-202ENST00000532566 4594 ntBASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AC004832.2-201ENST00000426397 482 ntBASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AC069335.1-201ENST00000489972 472 ntBASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AC084121.4-201ENST00000641598 221 ntBASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AF228730.8-201ENST00000642140 221 ntBASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRTM1Q9HBL6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms