Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 ACTBP11-201ENST00000436287 1126 ntBASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 GNAQP1-201ENST00000444815 1067 ntBASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 BNIP3P42-201ENST00000454982 569 ntBASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 BNIP3P29-201ENST00000598302 571 ntBASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 AC034229.4-201ENST00000607861 441 ntBASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 AC011447.5-201ENST00000616168 564 ntBASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
SCAF1Q9H7N4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 AL121949.1-201ENST00000402043 968 ntBASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 AC017099.1-201ENST00000448261 1028 ntBASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 AC002558.1-201ENST00000488906 803 ntBASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 AP005482.1-201ENST00000563722 1273 ntBASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF1Q9H7N4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 AC092053.1-201ENST00000605787 1936 ntBASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.81■■□□□ 1.4
SCAF1Q9H7N4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 AC015656.1-201ENST00000624209 3578 ntBASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 AL137784.3-201ENST00000623858 2288 ntBASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms