Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 TDH-203ENST00000531764 1110 ntBASIC18.36■□□□□ 0.53
SH2D4AQ9H788 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 AP005482.1-201ENST00000563722 1273 ntBASIC18.36■□□□□ 0.53
SH2D4AQ9H788 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 RPSAP52-203ENST00000622976 1023 ntBASIC18.36■□□□□ 0.53
SH2D4AQ9H788 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 AC018665.1-201ENST00000622927 1362 ntBASIC18.35■□□□□ 0.53
SH2D4AQ9H788 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 VDAC1P7-201ENST00000462417 847 ntBASIC18.35■□□□□ 0.53
SH2D4AQ9H788 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 PTP4A1P2-201ENST00000546033 454 ntBASIC18.35■□□□□ 0.53
SH2D4AQ9H788 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 AC009486.1-201ENST00000569860 813 ntBASIC18.35■□□□□ 0.53
SH2D4AQ9H788 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 AC079328.2-201ENST00000561241 3354 ntBASIC18.35■□□□□ 0.53
SH2D4AQ9H788 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH2D4AQ9H788 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.34■□□□□ 0.53
SH2D4AQ9H788 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 AL133267.1-201ENST00000398220 340 ntBASIC18.34■□□□□ 0.53
SH2D4AQ9H788 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 SLC25A47P1-201ENST00000531577 414 ntBASIC18.34■□□□□ 0.53
SH2D4AQ9H788 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 AL022328.1-201ENST00000610050 478 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms