Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 AL136982.4-201ENST00000437689 1740 ntBASIC14.15□□□□□ -0.14
NELFAQ9H3P2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.15□□□□□ -0.14
NELFAQ9H3P2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 CYMP-203ENST00000474680 1263 ntBASIC14.15□□□□□ -0.14
NELFAQ9H3P2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 AC027796.2-201ENST00000575326 344 ntBASIC14.15□□□□□ -0.14
NELFAQ9H3P2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.15□□□□□ -0.14
NELFAQ9H3P2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.15□□□□□ -0.14
NELFAQ9H3P2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 AC023824.1-201ENST00000562945 2975 ntBASIC14.14□□□□□ -0.15
NELFAQ9H3P2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 AC107890.1-201ENST00000422478 521 ntBASIC14.14□□□□□ -0.15
NELFAQ9H3P2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 DUX4L27-201ENST00000554796 1261 ntBASIC14.14□□□□□ -0.15
NELFAQ9H3P2 AC140878.1-201ENST00000565277 250 ntBASIC14.14□□□□□ -0.15
NELFAQ9H3P2 RN7SL828P-201ENST00000607615 303 ntBASIC14.14□□□□□ -0.15
NELFAQ9H3P2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 AC093512.1-201ENST00000617969 520 ntBASIC14.14□□□□□ -0.15
NELFAQ9H3P2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NELFAQ9H3P2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NELFAQ9H3P2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NELFAQ9H3P2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NELFAQ9H3P2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NELFAQ9H3P2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms