Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC22CQ9BRL7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.44□□□□□ -0.26
SEC22CQ9BRL7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC22CQ9BRL7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SEC22CQ9BRL7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.44□□□□□ -0.26
SEC22CQ9BRL7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC22CQ9BRL7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC22CQ9BRL7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.44□□□□□ -0.26
SEC22CQ9BRL7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 HSPA7-201ENST00000445535 1927 ntBASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 LIN28AP1-201ENST00000429574 405 ntBASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 VENTXP7-201ENST00000475503 772 ntBASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 AC010331.1-201ENST00000611423 582 ntBASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 AC073592.4-201ENST00000623827 446 ntBASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC22CQ9BRL7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 REXO1L1P-202ENST00000608646 1974 ntBASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 TSPY20P-201ENST00000450910 630 ntBASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
SEC22CQ9BRL7 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms