Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 AL118516.1-201ENST00000564152 670 ntBASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 MIR6842-201ENST00000612539 65 ntBASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 AC010234.1-201ENST00000494599 870 ntBASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 AC007663.3-201ENST00000609632 465 ntBASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.22□□□□□ -0.29
CSMD1Q96PZ7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 HLA-A-202ENST00000376806 1854 ntBASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 AL391256.1-201ENST00000443260 1855 ntBASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 PDIA3P2-201ENST00000428073 158 ntBASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD1Q96PZ7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD1Q96PZ7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AC078991.1-201ENST00000437297 610 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 CNN2P10-201ENST00000443067 918 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AC026410.1-201ENST00000507366 1101 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AC242376.1-201ENST00000559033 726 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AL022344.2-201ENST00000568976 968 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AC000095.1-201ENST00000603208 874 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms