Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NSMCE2Q96MF7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 GRK6P1-201ENST00000400595 1711 ntBASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 AC018892.3-201ENST00000623986 2499 ntBASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 CLEC4GP1-201ENST00000596555 870 ntBASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 AL009183.1-201ENST00000603760 355 ntBASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.98□□□□□ -0.01
NSMCE2Q96MF7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 AC023024.2-201ENST00000623561 1993 ntBASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 AC243562.2-201ENST00000561247 970 ntBASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.97□□□□□ -0.01
NSMCE2Q96MF7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms