Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC009090.5-201ENST00000624886 2285 ntBASIC13.99□□□□□ -0.17
AP3S1Q92572 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AP3S1Q92572 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
AP3S1Q92572 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 AL645939.2-201ENST00000427340 991 ntBASIC13.99□□□□□ -0.17
AP3S1Q92572 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 SLC25A6P2-201ENST00000497974 877 ntBASIC13.99□□□□□ -0.17
AP3S1Q92572 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.99□□□□□ -0.17
AP3S1Q92572 AC107918.2-201ENST00000530817 355 ntBASIC13.99□□□□□ -0.17
AP3S1Q92572 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.99□□□□□ -0.17
AP3S1Q92572 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 AL022326.1-202ENST00000641533 845 ntBASIC13.99□□□□□ -0.17
AP3S1Q92572 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AP3S1Q92572 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AP3S1Q92572 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.99□□□□□ -0.17
AP3S1Q92572 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP3S1Q92572 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
AP3S1Q92572 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S1Q92572 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S1Q92572 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 AC129492.6-201ENST00000611383 1305 ntBASIC13.98□□□□□ -0.17
AP3S1Q92572 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S1Q92572 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AP3S1Q92572 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
AP3S1Q92572 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.98□□□□□ -0.17
AP3S1Q92572 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S1Q92572 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S1Q92572 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S1Q92572 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S1Q92572 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S1Q92572 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S1Q92572 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms