Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 MIR648-201ENST00000385046 94 ntBASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 SDHAP3-202ENST00000515467 728 ntBASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 AC004233.3-201ENST00000607794 1269 ntBASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 AL109936.8-201ENST00000641772 604 ntBASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 MTHFR-217ENST00000641820 1569 ntBASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
FNDC9Q8TBE3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 AZGP1P1-201ENST00000411909 902 ntBASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 SPTLC1P1-201ENST00000447199 261 ntBASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 AC104794.3-201ENST00000566840 1248 ntBASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 MST1L-201ENST00000442552 2185 ntBASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 PAUPAR-201ENST00000630360 2965 ntBASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FNDC9Q8TBE3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.26□□□□□ -0.13
FNDC9Q8TBE3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms