Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AC126755.1-201ENST00000525846 6405 ntBASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 MIR600HG-201ENST00000449175 5984 ntBASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 AL080243.2-201ENST00000418783 582 ntBASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 AL033527.5-202ENST00000641632 1098 ntBASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 AP003680.1-201ENST00000598970 3660 ntBASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SRFBP1Q8NEF9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 RPL37AP1-201ENST00000412502 279 ntBASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 AC027369.6-201ENST00000525520 931 ntBASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 MIR4313-201ENST00000580760 101 ntBASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 AL138828.2-201ENST00000615812 383 ntBASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
SRFBP1Q8NEF9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms