Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AL354989.2-201ENST00000435838 1540 ntBASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AC025181.2-201ENST00000606994 802 ntBASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 AP000346.4-201ENST00000614827 381 ntBASIC24.18■■□□□ 1.46
CFAP43Q8NDM7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 AL513523.2-202ENST00000427283 2040 ntBASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 EEF1DP6-201ENST00000449232 372 ntBASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFAP43Q8NDM7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 KRT8P35-201ENST00000483942 1338 ntBASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 RNA5SP486-201ENST00000515961 83 ntBASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFAP43Q8NDM7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 AC134698.3-201ENST00000523880 214 ntBASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 MIR3907-201ENST00000579424 151 ntBASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC24.15■■□□□ 1.46
CFAP43Q8NDM7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms