Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 AC087499.6-201ENST00000411576 835 ntBASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAM1L1Q8N609 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 AC092127.1-201ENST00000567093 3455 ntBASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 AC190387.1-201ENST00000551683 408 ntBASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 AC036164.1-201ENST00000570544 333 ntBASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 AC000095.1-201ENST00000603208 874 ntBASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAM1L1Q8N609 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 FER1L4-210ENST00000615531 5998 ntBASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms