Protein–RNA interactions for Protein: Q8IZA3

H1FOO, Histone H1oo, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1FOOQ8IZA3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AC009078.2-202ENST00000463353 338 ntBASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AL513190.1-201ENST00000621254 727 ntBASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AC008267.7-201ENST00000624570 1194 ntBASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AC007292.2-201ENST00000593524 1812 ntBASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 AC126365.1-201ENST00000578585 1514 ntBASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1FOOQ8IZA3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 AC142381.1-201ENST00000426099 345 ntBASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 AC027307.2-201ENST00000591252 911 ntBASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 AL450472.2-201ENST00000603663 1156 ntBASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1FOOQ8IZA3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 OR2I1P-209ENST00000641730 5365 ntBASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.15□□□□□ -0.3
H1FOOQ8IZA3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms