Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN4BQ8IWT1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SCN4BQ8IWT1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SCN4BQ8IWT1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
SCN4BQ8IWT1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 AC011495.1-201ENST00000498085 584 ntBASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCN4BQ8IWT1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 AC024909.3-201ENST00000611513 2257 ntBASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 TOMM22P5-201ENST00000416399 439 ntBASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SCN4BQ8IWT1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SCN4BQ8IWT1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms