Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 BTBD6P1-201ENST00000412176 1267 ntBASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 CD8B2-202ENST00000417670 633 ntBASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 AP001258.2-201ENST00000529891 490 ntBASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 AC006453.4-201ENST00000636949 1252 ntBASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS4Q8IUM7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.77■□□□□ 0.27
NPAS4Q8IUM7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.77■□□□□ 0.27
NPAS4Q8IUM7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS4Q8IUM7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.77■□□□□ 0.27
NPAS4Q8IUM7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 ACTBP8-201ENST00000403258 1108 ntBASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 MIR1202-201ENST00000408529 83 ntBASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 AL590640.2-201ENST00000457038 527 ntBASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 AD000864.1-201ENST00000624076 2295 ntBASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS4Q8IUM7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 KLF2P2-201ENST00000416807 1039 ntBASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 AC104306.2-201ENST00000451877 341 ntBASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NPAS4Q8IUM7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms