Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 AL139094.1-201ENST00000405549 1188 ntBASIC19.49■□□□□ 0.71
COL23A1Q86Y22 AC098935.1-201ENST00000446057 611 ntBASIC19.49■□□□□ 0.71
COL23A1Q86Y22 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 AC020922.3-201ENST00000595064 547 ntBASIC19.49■□□□□ 0.71
COL23A1Q86Y22 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL23A1Q86Y22 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 AC004923.1-202ENST00000642106 209 ntBASIC19.48■□□□□ 0.71
COL23A1Q86Y22 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL23A1Q86Y22 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 BCL2-203ENST00000589955 5011 ntBASIC19.47■□□□□ 0.71
COL23A1Q86Y22 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 EIF3FP3-201ENST00000434851 1086 ntBASIC19.47■□□□□ 0.71
COL23A1Q86Y22 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 PGAM1P5-201ENST00000548011 764 ntBASIC19.47■□□□□ 0.71
COL23A1Q86Y22 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 AC135983.4-201ENST00000564116 1262 ntBASIC19.47■□□□□ 0.71
COL23A1Q86Y22 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL23A1Q86Y22 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL23A1Q86Y22 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.46■□□□□ 0.71
COL23A1Q86Y22 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL23A1Q86Y22 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms