Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00299Q6ZSB3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00299Q6ZSB3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00299Q6ZSB3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00299Q6ZSB3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC00299Q6ZSB3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC00299Q6ZSB3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00299Q6ZSB3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00299Q6ZSB3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00299Q6ZSB3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
LINC00299Q6ZSB3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00299Q6ZSB3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.83□□□□□ -0.19
LINC00299Q6ZSB3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
LINC00299Q6ZSB3 MIR600HG-201ENST00000449175 5984 ntBASIC13.83□□□□□ -0.19
LINC00299Q6ZSB3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 AL390955.1-201ENST00000428694 934 ntBASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 AL031432.5-201ENST00000641059 760 ntBASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00299Q6ZSB3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 AC083964.2-201ENST00000623988 2396 ntBASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 SPDYE15P-201ENST00000424157 909 ntBASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 MIR5787-201ENST00000611784 55 ntBASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 FAM197Y4-202ENST00000622692 608 ntBASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 AC114271.1-201ENST00000612689 2813 ntBASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 AC020658.7-201ENST00000624274 2442 ntBASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 AC016397.2-201ENST00000624848 1985 ntBASIC13.82□□□□□ -0.2
LINC00299Q6ZSB3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 AC131902.2-201ENST00000566892 2172 ntBASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms