Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 AP001160.2-201ENST00000596071 487 ntBASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 AC026979.3-201ENST00000607315 403 ntBASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 AL596442.2-201ENST00000610240 980 ntBASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 PKD1P5-201ENST00000532415 10291 ntBASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 AC006058.4-201ENST00000624016 1670 ntBASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 PHKG1P2-201ENST00000457537 863 ntBASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NHLRC1Q6VVB1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 FAM45BP-202ENST00000592932 1624 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 MIR1233-2-201ENST00000408138 82 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 MIR1233-1-201ENST00000408722 82 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 AL353705.2-201ENST00000428243 662 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms