Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 REXO1L1P-202ENST00000608646 1974 ntBASIC16.82■□□□□ 0.28
VSTM1Q6UX27 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 AC087499.6-201ENST00000411576 835 ntBASIC16.82■□□□□ 0.28
VSTM1Q6UX27 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 PHKG1P2-201ENST00000457537 863 ntBASIC16.82■□□□□ 0.28
VSTM1Q6UX27 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 AL358472.5-202ENST00000641448 1267 ntBASIC16.82■□□□□ 0.28
VSTM1Q6UX27 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 AC112504.1-201ENST00000623415 1841 ntBASIC16.82■□□□□ 0.28
VSTM1Q6UX27 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSTM1Q6UX27 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 API5-211ENST00000534695 560 ntTSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 AL450472.2-201ENST00000603663 1156 ntBASIC16.81■□□□□ 0.28
VSTM1Q6UX27 AC004790.1-201ENST00000612686 536 ntBASIC16.81■□□□□ 0.28
VSTM1Q6UX27 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSTM1Q6UX27 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms