Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AL139400.1-201ENST00000366220 510 ntBASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 DNAJB3-202ENST00000449667 1266 ntBASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AC109322.1-201ENST00000524499 1264 ntBASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AL512356.2-201ENST00000546955 174 ntBASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AC138035.3-201ENST00000622706 2791 ntBASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 AC006486.2-201ENST00000624246 2199 ntBASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF549Q6P9A3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 KRT18P13-201ENST00000400056 1290 ntBASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 MTND6P24-201ENST00000440466 518 ntBASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 SNHG9-202ENST00000564014 471 ntBASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 KRT8P12-202ENST00000472924 1397 ntBASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF549Q6P9A3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF549Q6P9A3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms