Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 AC025580.3-201ENST00000617932 1424 ntBASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TMEM53Q6P2H8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM53Q6P2H8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms