Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 AC005730.2-201ENST00000564549 1184 ntBASIC19.56■□□□□ 0.72
RC3H1Q5TC82 AL645939.5-201ENST00000606834 243 ntBASIC19.56■□□□□ 0.72
RC3H1Q5TC82 AC022748.3-201ENST00000621828 275 ntBASIC19.56■□□□□ 0.72
RC3H1Q5TC82 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 AL158070.2-201ENST00000623713 1621 ntBASIC19.55■□□□□ 0.72
RC3H1Q5TC82 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 AC091046.1-201ENST00000331871 207 ntBASIC19.55■□□□□ 0.72
RC3H1Q5TC82 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 AL391280.1-201ENST00000506969 1062 ntBASIC19.55■□□□□ 0.72
RC3H1Q5TC82 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 AC022217.1-201ENST00000521069 738 ntBASIC19.55■□□□□ 0.72
RC3H1Q5TC82 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 OR10B1P-201ENST00000601666 907 ntBASIC19.55■□□□□ 0.72
RC3H1Q5TC82 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 AP001002.3-201ENST00000623482 206 ntBASIC19.55■□□□□ 0.72
RC3H1Q5TC82 AL645728.2-202ENST00000641679 227 ntBASIC19.55■□□□□ 0.72
RC3H1Q5TC82 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RC3H1Q5TC82 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 HIST2H2BB-201ENST00000449108 381 ntBASIC19.54■□□□□ 0.72
RC3H1Q5TC82 AC100850.1-201ENST00000506768 649 ntBASIC19.54■□□□□ 0.72
RC3H1Q5TC82 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 AL023803.2-201ENST00000620080 638 ntBASIC19.54■□□□□ 0.72
RC3H1Q5TC82 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 AC022188.1-201ENST00000620960 1664 ntBASIC19.54■□□□□ 0.72
RC3H1Q5TC82 AC106820.2-201ENST00000563775 3264 ntBASIC19.54■□□□□ 0.72
RC3H1Q5TC82 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RC3H1Q5TC82 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 DPM3-202ENST00000368399 517 ntBASIC19.53■□□□□ 0.72
RC3H1Q5TC82 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 AC253536.4-201ENST00000440539 267 ntBASIC19.53■□□□□ 0.72
RC3H1Q5TC82 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 AC106820.3-201ENST00000561653 397 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms