Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH4P55283 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH4P55283 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH4P55283 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH4P55283 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH4P55283 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH4P55283 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH4P55283 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH4P55283 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH4P55283 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH4P55283 AC015910.1-201ENST00000579400 975 ntBASIC16.1■□□□□ 0.17
CDH4P55283 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH4P55283 AC000095.1-201ENST00000603208 874 ntBASIC16.1■□□□□ 0.17
CDH4P55283 AC025048.6-201ENST00000634326 1161 ntBASIC16.1■□□□□ 0.17
CDH4P55283 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 PRAL-201ENST00000624952 3286 ntBASIC16.1■□□□□ 0.17
CDH4P55283 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH4P55283 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH4P55283 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH4P55283 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
CDH4P55283 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CDH4P55283 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH4P55283 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH4P55283 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.09■□□□□ 0.17
CDH4P55283 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH4P55283 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDH4P55283 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH4P55283 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH4P55283 MYCLP2-201ENST00000449268 967 ntBASIC16.09■□□□□ 0.17
CDH4P55283 FAM86LP-201ENST00000478302 853 ntBASIC16.09■□□□□ 0.17
CDH4P55283 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH4P55283 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.09■□□□□ 0.17
CDH4P55283 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH4P55283 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 AC008494.3-201ENST00000606615 944 ntBASIC16.09■□□□□ 0.17
CDH4P55283 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDH4P55283 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH4P55283 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH4P55283 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CDH4P55283 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDH4P55283 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDH4P55283 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDH4P55283 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CDH4P55283 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH4P55283 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDH4P55283 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDH4P55283 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH4P55283 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDH4P55283 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH4P55283 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH4P55283 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH4P55283 AC008894.3-201ENST00000624324 3103 ntBASIC16.08■□□□□ 0.17
CDH4P55283 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDH4P55283 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CDH4P55283 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.08■□□□□ 0.17
CDH4P55283 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CDH4P55283 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH4P55283 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CDH4P55283 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
CDH4P55283 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDH4P55283 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH4P55283 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.08■□□□□ 0.16
CDH4P55283 TMEM261P1-201ENST00000604899 340 ntBASIC16.08■□□□□ 0.16
CDH4P55283 AL358472.5-202ENST00000641448 1267 ntBASIC16.08■□□□□ 0.16
CDH4P55283 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDH4P55283 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH4P55283 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH4P55283 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
CDH4P55283 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CDH4P55283 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH4P55283 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CDH4P55283 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms