Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PSMD4P55036 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.78□□□□□ -0.04
PSMD4P55036 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.78□□□□□ -0.04
PSMD4P55036 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.78□□□□□ -0.04
PSMD4P55036 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
PSMD4P55036 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
PSMD4P55036 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PSMD4P55036 CETN4P-206ENST00000642099 2168 ntBASIC14.78□□□□□ -0.04
PSMD4P55036 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PSMD4P55036 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.77□□□□□ -0.04
PSMD4P55036 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
PSMD4P55036 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.77□□□□□ -0.04
PSMD4P55036 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.77□□□□□ -0.04
PSMD4P55036 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.77□□□□□ -0.04
PSMD4P55036 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.77□□□□□ -0.04
PSMD4P55036 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.77□□□□□ -0.04
PSMD4P55036 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.77□□□□□ -0.04
PSMD4P55036 TUBB3P1-201ENST00000405796 1332 ntBASIC14.77□□□□□ -0.04
PSMD4P55036 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PSMD4P55036 REXO1L1P-202ENST00000608646 1974 ntBASIC14.77□□□□□ -0.04
PSMD4P55036 PCDHA3-202ENST00000532566 4594 ntBASIC14.77□□□□□ -0.04
PSMD4P55036 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.77□□□□□ -0.04
PSMD4P55036 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PSMD4P55036 FO393414.2-201ENST00000405153 598 ntBASIC14.77□□□□□ -0.05
PSMD4P55036 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.77□□□□□ -0.05
PSMD4P55036 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.77□□□□□ -0.05
PSMD4P55036 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.77□□□□□ -0.05
PSMD4P55036 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.77□□□□□ -0.05
PSMD4P55036 AC109322.1-201ENST00000524499 1264 ntBASIC14.77□□□□□ -0.05
PSMD4P55036 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.77□□□□□ -0.05
PSMD4P55036 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.77□□□□□ -0.05
PSMD4P55036 AC105917.1-201ENST00000506637 2539 ntBASIC14.77□□□□□ -0.05
PSMD4P55036 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.77□□□□□ -0.05
PSMD4P55036 TCAF2P1-201ENST00000291129 2421 ntBASIC14.77□□□□□ -0.05
PSMD4P55036 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.77□□□□□ -0.05
PSMD4P55036 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
PSMD4P55036 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PSMD4P55036 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PSMD4P55036 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.77□□□□□ -0.05
PSMD4P55036 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.77□□□□□ -0.05
PSMD4P55036 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PSMD4P55036 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PSMD4P55036 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PSMD4P55036 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PSMD4P55036 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.76□□□□□ -0.05
PSMD4P55036 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PSMD4P55036 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PSMD4P55036 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PSMD4P55036 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PSMD4P55036 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PSMD4P55036 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms